The Automated Measure Calculation will give you a summary of all calculated measures of the Promoting Interoperability Medicaid program and Medicare MIPS section in one screen, separated out per provider. Every Medicaid provider will be attesting to the Medicaid Promoting Interoperability. So this report should be run with that option selected. Every Medicare provider will be attesting to MIPS
For more information on each measure, please see the documentation for that specific report.